BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB034A06SP1|AL429836
(873 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1188 1729 0.0
>3x_Contig1188
Length = 4443
Score = 1729 bits (872), Expect = 0.0
Identities = 872/872 (100%)
Strand = Plus / Minus
Query: 2 cttacaatcgtctttgagaattcaagtgttcccaagcacagtaattgttggtgagctcgt 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3187 cttacaatcgtctttgagaattcaagtgttcccaagcacagtaattgttggtgagctcgt 3128
Query: 62 cacaatacacgttaatagcaagttttaagtgcgaattttgggttttacttctattcccct 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3127 cacaatacacgttaatagcaagttttaagtgcgaattttgggttttacttctattcccct 3068
Query: 122 ttctcaaaatcagatttccctacagttgaaagaaaactgaaaagaaaaagatctgattgc 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3067 ttctcaaaatcagatttccctacagttgaaagaaaactgaaaagaaaaagatctgattgc 3008
Query: 182 gtatacttatctgttactgtagtctggtggccaattccagtgtacatcttttgtttcgac 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3007 gtatacttatctgttactgtagtctggtggccaattccagtgtacatcttttgtttcgac 2948
Query: 242 ttggtttaaaccttttgttttatttctgaaaagcagtttagctgggatcagttgttttat 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2947 ttggtttaaaccttttgttttatttctgaaaagcagtttagctgggatcagttgttttat 2888
Query: 302 ctgtattggacgcgtgtgttttattagattcctcgataggaagcgttggtaagagatatg 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2887 ctgtattggacgcgtgtgttttattagattcctcgataggaagcgttggtaagagatatg 2828
Query: 362 tcacagcacgggttcgatttcaagttcagtcaatgctttggtgataaagcagatatcgtg 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2827 tcacagcacgggttcgatttcaagttcagtcaatgctttggtgataaagcagatatcgtg 2768
Query: 422 gttacagaggcagacattataacggcgtcggagttcgatcatacaggtgattatcttgca 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2767 gttacagaggcagacattataacggcgtcggagttcgatcatacaggtgattatcttgca 2708
Query: 482 accggtgatagaggtggacgtgtagttttatttgaaaggaacaatacaaagcattgcgaa 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2707 accggtgatagaggtggacgtgtagttttatttgaaaggaacaatacaaagcattgcgaa 2648
Query: 542 tacaagtttctaacggaatttcagtcacacgatgcagaattcgattatttgaaatcttta 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2647 tacaagtttctaacggaatttcagtcacacgatgcagaattcgattatttgaaatcttta 2588
Query: 602 gagattgaggagaagattaatcagatcaagtggtgtcggccaacgaaccaatcgcatttc 661
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2587 gagattgaggagaagattaatcagatcaagtggtgtcggccaacgaaccaatcgcatttc 2528
Query: 662 ttgttaagtacaaacgataagacgattaagttgtggaagatatatgagaaaaatatcaaa 721
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2527 ttgttaagtacaaacgataagacgattaagttgtggaagatatatgagaaaaatatcaaa 2468
Query: 722 ttggttagtgataacaatctatcagagggaaataaagactaccacagacgctctgctggg 781
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2467 ttggttagtgataacaatctatcagagggaaataaagactaccacagacgctctgctggg 2408
Query: 782 aacggtagcgcaagagctgtactgtctttgcagactttgaagttacccaagctgtcctta 841
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2407 aacggtagcgcaagagctgtactgtctttgcagactttgaagttacccaagctgtcctta 2348
Query: 842 catgatagaattatagctgctgcaccaaagaa 873
||||||||||||||||||||||||||||||||
Sbjct: 2347 catgatagaattatagctgctgcaccaaagaa 2316
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7210
Number of Sequences: 1807
Number of extensions: 7210
Number of successful extensions: 47
Number of sequences better than 1.0e-20: 1
length of query: 873
length of database: 10,358,551
effective HSP length: 16
effective length of query: 857
effective length of database: 10,329,639
effective search space: 8852500623
effective search space used: 8852500623
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)